Products for Research Use Only

DMT-2'Fluoro-DG (IB) Amidite

CAT: 0013-GTR19189640-01Size: 200 mgDry Ice: NoHazardous: No
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CAT#:0013-GTR19189640-01Size:200 mg
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Description
DMT-2'Fluoro-DG (IB) Amidite (2'-F-ibu-dG Phosphoramidite) is a modified nucleoside building block for oligonucleotide synthesis. It is specifically used to incorporate 2'-fluoro-2'-deoxyguanosine analogs into nucleic acid strands for in vitro and in vivo research, including studies on RNAi therapeutics and aptamer stability.
CAS Number
144089-97-4
Field of Research
Cell Biology, Molecular Biology, Musculoskeletal & Connective Tissue Research
Smiles
C (OC[C@@H]1[C@@H] (OP (N (C (C) C) C (C) C) OCCC#N) [C@@H] (F) [C@@H] (O1) N2C3=C (N=C2) C (=O) N=C (NC (C (C) C) =O) N3) (C4=CC=C (OC) C=C4) (C5=CC=C (OC) C=C5) C6=CC=CC=C6
Molecular Formula
C44H53FN7O8P
Molecular Weight
857.91
Storage Conditions
-20°C
Notes
For research use only.

Chemical Information

Guanosine, 5'-O-(bis(4-methoxyphenyl)phenylmethyl)-2'-deoxy-2'-fluoro-N-(2-methyl-1-oxopropyl)-, 3'-(2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite)
CAS Number144089-97-4
PubChem CID135448972
IUPAC NameN-[9-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-fluorooxolan-2-yl]-6-oxo-1H-purin-2-yl]-2-methylpropanamide
Molecular FormulaC44H53FN7O8P
Molecular Weight857.9
XLogP6.1
Topological Polar Surface Area171
Hydrogen Bond Donor Count2
Hydrogen Bond Acceptor Count13
Rotatable Bond Count19
Heavy Atom Count61
Formal Charge0
Complexity1480
SMILES
CC(C)C(=O)NC1=NC2=C(C(=O)N1)N=CN2[C@H]3[C@@H]([C@@H]([C@H](O3)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC)OP(N(C(C)C)C(C)C)OCCC#N)F
InChI
InChI=1S/C44H53FN7O8P/c1-27(2)40(53)49-43-48-39-37(41(54)50-43)47-26-51(39)42-36(45)38(60-61(58-24-12-23-46)52(28(3)4)29(5)6)35(59-42)25-57-44(30-13-10-9-11-14-30,31-15-19-33(55-7)20-16-31)32-17-21-34(56-8)22-18-32/h9-11,13-22,26-29,35-36,38,42H,12,24-25H2,1-8H3,(H2,48,49,50,53,54)/t35-,36-,38-,42-,61?/m1/s1
InChIKey
KJFUMXZZVYMQEU-AOCJBPQJSA-N
Chemical Structure
2D Structure
2D structure of Guanosine, 5'-O-(bis(4-methoxyphenyl)phenylmethyl)-2'-deoxy-2'-fluoro-N-(2-methyl-1-oxopropyl)-, 3'-(2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite)
CAS: 144089-97-4
CID: 135448972
Formula: C44H53FN7O8P
MW: 857.9
Interactive 3D Structure
Loading 3D structure...
Computed Properties
PropertyValue
Molecular Weight857.9
XLogP36.1
Hydrogen Bond Donor Count2
Hydrogen Bond Acceptor Count13
Rotatable Bond Count19
Exact Mass857.36772683
Monoisotopic Mass857.36772683
Topological Polar Surface Area171 Ų
Heavy Atom Count61
Formal Charge0
Complexity1480
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count1
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes