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DiR (solution)

CAT: 0804-HY-DY1013-01Size: 200 µLDry Ice: NoHazardous: No
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CAT#:0804-HY-DY1013-01Size:200 µL
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Description
DiR (solution) is a long-chain carbocyanine dye. Carbocyanine dyes are widely used as Di to label cells, organelles, liposomes, viruses and lipoproteins[2].Solvent and concentration: DMSO: 5 mM
CAS Number
100068-60-8
UNSPSC
12171500
Target
Fluorescent Dye
Related Pathways
Others
Field of Research
Cancer
Smiles
CCCCCCCCCCCCCCCCCC[N+]1=C(/C=C/C=C/C=C/C=C2N(CCCCCCCCCCCCCCCCCC)C3=C(C=CC=C3)C/2(C)C)C(C)(C)C4=C1C=CC=C4.[I-]
Molecular Formula
C63H101IN2
Molecular Weight
1013.42
References & Citations
[1]Gan WB, et al. Multicolor "DiOlistic" labeling of the nervous system using lipophilic dye combinations. Neuron. 2000 Aug;27 (2) :219-25.|[2]Swift MJ, et al. Applied electric fields accelerate the diffusion rate and increase the diffusion distance of DiI in fixed tissue. J Neurosci Methods. 2005 Jan 30;141 (1) :155-63.
Shipping Conditions
Room temperature
Scientific Category
Dye Reagents
Clinical Information
No Development Reported

Chemical Information

Cy7 DiC18

See also: diIC18(7) dye (preferred).

CAS Number100068-60-8
PubChem CID74405886
IUPAC Name2-[7-(3,3-dimethyl-1-octadecylindol-1-ium-2-yl)hepta-2,4,6-trienylidene]-3,3-dimethyl-1-octadecylindole iodide
Molecular FormulaC63H101IN2
Molecular Weight1013.4
Topological Polar Surface Area6.3
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count2
Rotatable Bond Count38
Heavy Atom Count66
Formal Charge0
Complexity1260
SMILES
CCCCCCCCCCCCCCCCCCN1C2=CC=CC=C2C(C1=CC=CC=CC=CC3=[N+](C4=CC=CC=C4C3(C)C)CCCCCCCCCCCCCCCCCC)(C)C.[I-]
InChI
InChI=1S/C63H101N2.HI/c1-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38-46-54-64-58-50-44-42-48-56(58)62(3,4)60(64)52-40-36-35-37-41-53-61-63(5,6)57-49-43-45-51-59(57)65(61)55-47-39-34-32-30-28-26-24-22-20-18-16-14-12-10-8-2;/h35-37,40-45,48-53H,7-34,38-39,46-47,54-55H2,1-6H3;1H/q+1;/p-1
InChIKey
JLIOTPLALDYAEH-UHFFFAOYSA-M
Chemical Structure
2D Structure
2D structure of Cy7 DiC18
CAS: 100068-60-8
CID: 74405886
Formula: C63H101IN2
MW: 1013.4
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight1013.4
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count2
Rotatable Bond Count38
Exact Mass1012.70095
Monoisotopic Mass1012.70095
Topological Polar Surface Area6.3 Ų
Heavy Atom Count66
Formal Charge0
Complexity1260
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count4
Covalently-Bonded Unit Count2
Compound Is CanonicalizedYes

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