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DiD perchlorate (solution)

CAT: 0804-HY-D1028Y-02Size: 959.9 μg (5 mM x 200 μL in DMSO)Dry Ice: NoHazardous: No
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CAT#:0804-HY-D1028Y-02Size:959.9 μg (5 mM x 200 μL in DMSO)
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24/48H Stock Items & 2 to 6 Weeks non Stock Items.
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Description
DiD perchlorate (solution) is a long-chain carbocyanine dye. Carbocyanine dyes are widely used as Di to label cells, organelles, liposomes, viruses and lipoproteins[2].
CAS Number
127274-91-3
UNSPSC
12352005
Target
Fluorescent Dye
Related Pathways
Others
Field of Research
Others
Concentration
5 mM * 200 μL in DMSO
Smiles
CCCCCCCCCCCCCCCCCCN1C2=C(C=CC=C2)C(C)(C)/C1=C\C=C\C=C\C3=[N+](C4=C(C=CC=C4)C3(C)C)CCCCCCCCCCCCCCCCCC.O=Cl(=O)([O-])=O
Molecular Formula
C61H99ClN2O4
Molecular Weight
959.90
References & Citations
[1]Gan WB, et al. Multicolor "DiOlistic" labeling of the nervous system using lipophilic dye combinations. Neuron. 2000 Aug;27 (2) :219-25.|[2]Lo Celso C, et al. Live-animal tracking of individual haematopoietic stem/progenitor cells in their niche.|[3]Kenji Yumoto, et al. A novel method for monitoring tumor dormancy using fluorescent dye DiD. Cytometry A. 2014 Jun; 85 (6) : 548–555.|[4]Meng Li, et al. In Vivo Tracking of Human Adipose-derived Mesenchymal Stem Cells in a Rat Knee Osteoarthritis Model with Fluorescent Lipophilic Membrane Dye. J Vis Exp. 2017; (128) : 56273.
Shipping Conditions
Blue Ice
Storage Conditions
Store at -20°C for 1 year, protect from light. Avoid repeated freezing and thawing
Scientific Category
Dye Reagents
Clinical Information
No Development Reported

Chemical Information

DiD perchlorate

See also: Cs-8080 (preferred).

CAS Number127274-91-3
PubChem CID2762629
IUPAC Name2-[5-(3,3-dimethyl-1-octadecylindol-1-ium-2-yl)penta-2,4-dienylidene]-3,3-dimethyl-1-octadecylindole perchlorate
Molecular FormulaC61H99ClN2O4
Molecular Weight959.9
Topological Polar Surface Area80.5
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count5
Rotatable Bond Count37
Heavy Atom Count68
Formal Charge0
Complexity1280
SMILES
CCCCCCCCCCCCCCCCCCN1C2=CC=CC=C2C(C1=CC=CC=CC3=[N+](C4=CC=CC=C4C3(C)C)CCCCCCCCCCCCCCCCCC)(C)C.[O-]Cl(=O)(=O)=O
InChI
InChI=1S/C61H99N2.ClHO4/c1-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-44-52-62-56-48-42-40-46-54(56)60(3,4)58(62)50-38-37-39-51-59-61(5,6)55-47-41-43-49-57(55)63(59)53-45-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-2;2-1(3,4)5/h37-43,46-51H,7-36,44-45,52-53H2,1-6H3;(H,2,3,4,5)/q+1;/p-1
InChIKey
ZQSBJPAQPRVNHU-UHFFFAOYSA-M
Chemical Structure
2D Structure
2D structure of DiD perchlorate
CAS: 127274-91-3
CID: 2762629
Formula: C61H99ClN2O4
MW: 959.9
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight959.9
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count5
Rotatable Bond Count37
Exact Mass958.7293373
Monoisotopic Mass958.7293373
Topological Polar Surface Area80.5 Ų
Heavy Atom Count68
Formal Charge0
Complexity1280
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count3
Covalently-Bonded Unit Count2
Compound Is CanonicalizedYes

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