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3’-Deoxy-5-methycytidine

CAT: 0804-HY-154200Size: 1 EachDry Ice: NoHazardous: No
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Description
3’-Deoxy-5-methycytidine is a purine nucleoside analog. Purine nucleoside analogs have broad antitumor activity targeting indolent lymphoid malignancies. Anticancer mechanisms in this process rely on inhibition of DNA synthesis, induction of apoptosis, etc[1].
CAS Number
7057-38-7
UNSPSC
12352005
Target
Nucleoside Antimetabolite/Analog
Type
Oligonucleotides
Related Pathways
Cell Cycle/DNA Damage
Applications
Cancer-programmed cell death
Field of Research
Cancer
Assay Protocol
https://www.medchemexpress.com/3-deoxy-5-methycytidine.html
Solubility
10 mM in DMSO
Smiles
O[C@@H]1C[C@@H](CO)O[C@H]1N2C=C(C)C(N)=NC2=O
Molecular Formula
C10H15N3O4
Molecular Weight
241.24
References & Citations
[1]Robak T, Robak P. Purine nucleoside analogs in the treatment of rarer chronic lymphoid leukemias. Curr Pharm Des. 2012;18 (23) :3373-88.
Shipping Conditions
Room temperature
Scientific Category
Oligonucleotides
Clinical Information
No Development Reported

Chemical Information

3'-Deoxy-5-methycytidine
CAS Number7057-38-7
PubChem CID9921121
IUPAC Name4-amino-1-[(2R,3R,5S)-3-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidin-2-one
Molecular FormulaC10H15N3O4
Molecular Weight241.24
XLogP-2
Topological Polar Surface Area108
Hydrogen Bond Donor Count3
Hydrogen Bond Acceptor Count4
Rotatable Bond Count2
Heavy Atom Count17
Formal Charge0
Complexity393
SMILES
CC1=CN(C(=O)N=C1N)[C@H]2[C@@H](C[C@H](O2)CO)O
InChI
InChI=1S/C10H15N3O4/c1-5-3-13(10(16)12-8(5)11)9-7(15)2-6(4-14)17-9/h3,6-7,9,14-15H,2,4H2,1H3,(H2,11,12,16)/t6-,7+,9+/m0/s1
InChIKey
HSQDGPFZYIOIAS-LKEWCRSYSA-N
Chemical Structure
2D Structure
2D structure of 3'-Deoxy-5-methycytidine
CAS: 7057-38-7
CID: 9921121
Formula: C10H15N3O4
MW: 241.24
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight241.24
XLogP3-2
Hydrogen Bond Donor Count3
Hydrogen Bond Acceptor Count4
Rotatable Bond Count2
Exact Mass241.10625597
Monoisotopic Mass241.10625597
Topological Polar Surface Area108 Ų
Heavy Atom Count17
Formal Charge0
Complexity393
Isotope Atom Count0
Defined Atom Stereocenter Count3
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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Alternative Products

CatalogName
GTR19214032-013'-Deoxy-5-methycytidine
295687-013'-Deoxy-5-methyluridine
MBS58258483'-Deoxy-5-methoxyuridine
MBS58258473'-Deoxy-5-fluorouridine
TNU1569-013'-Deoxy-5-trifluoromethyluridine
TNU0363-013'-Deoxy-3',5-difluorocytidine
N-30043'-Deoxy-5-Methyluridine-5'-Triphosphate
AR-C01260-015-Deoxy-1,2,3-triacetyl-5-deoxy-?-D-ribose
0081555-Deoxy-1,2,3-triacetyl-5-deoxy-β-D-ribose
NA163051-013'-Azido-3'-deoxy-5-methylcytidine

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