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2'-Deoxy-5-hydroxymethyluridine

CAT: 0926-ND08018-01Size: 50 mgDry Ice: NoHazardous: No
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CAT#:0926-ND08018-01Size:50 mg
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24/48H Stock Items & 2 to 6 Weeks non Stock Items.
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CAS Number
5116-24-5
Synonyms
2'-Deoxy-5-hydroxymethyl-D-uridine;5-Hydroxymethyl-2'-deoxyuridine
MDL Number
MFCD00047489
Smiles
C1[C@@H] ([C@H] (O[C@H]1N2C=C (C (=O) NC2=O) CO) CO) O
Molecular Formula
C10H14N2O6
Molecular Weight
258.23 g/mol
Controlled
No

Chemical Information

5-Hydroxymethyl-2'-deoxyuridine

5-hydroxymethyl-2'-deoxyuridine is a pyrimidine 2'-deoxyribonucleoside composed of 2'-deoxyuridine having a 5-hydroxymethyl substituent. It is functionally related to a 5-hydroxymethyluracil.

CAS Number5116-24-5
PubChem CID91541
IUPAC Name1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-(hydroxymethyl)pyrimidine-2,4-dione
Molecular FormulaC10H14N2O6
Molecular Weight258.23
XLogP-1.9
Topological Polar Surface Area119
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count6
Rotatable Bond Count3
Heavy Atom Count18
Formal Charge0
Complexity396
SMILES
C1[C@@H]([C@H](O[C@H]1N2C=C(C(=O)NC2=O)CO)CO)O
InChI
InChI=1S/C10H14N2O6/c13-3-5-2-12(10(17)11-9(5)16)8-1-6(15)7(4-14)18-8/h2,6-8,13-15H,1,3-4H2,(H,11,16,17)/t6-,7+,8+/m0/s1
InChIKey
IPAVKOYJGUMINP-XLPZGREQSA-N
Chemical Structure
2D Structure
2D structure of 5-Hydroxymethyl-2'-deoxyuridine
CAS: 5116-24-5
CID: 91541
Formula: C10H14N2O6
MW: 258.23
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight258.23
XLogP3-1.9
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count6
Rotatable Bond Count3
Exact Mass258.08518617
Monoisotopic Mass258.08518617
Topological Polar Surface Area119 Ų
Heavy Atom Count18
Formal Charge0
Complexity396
Isotope Atom Count0
Defined Atom Stereocenter Count3
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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