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5' (E) -VP-2'-OMe-U Phosphoramidite

CAT: 0931-TSW-01145-01Size: 10 mgDry Ice: NoHazardous: No
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CAT#:0931-TSW-01145-01Size:10 mg
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CAS Number
1882067-09-5
Target
Others
Related Pathways
Others
Bioactivity
5' (E) -VP-2'-OMe-U Phosphoramidite is a phosphoramidite compound that includes a 5' DMT group and uridine with a 2'-O-methyl protection. It is utilized in the synthesis of oligonucleotides.
Smiles
O(P(N(C(C)C)C(C)C)OCCC#N)[C@H]1[C@@H](OC)[C@@H](O[C@@H]1C=CP(OCOC(C(C)(C)C)=O)(OCOC(C(C)(C)C)=O)=O)N2C(=O)NC(=O)C=C2
Molecular Formula
C32H52N4O13P2
Molecular Weight
762.72
Shipping Conditions
Ice Packs
Storage Temperature
-20°C

Chemical Information

[2-[(2R,3R,4R,5R)-3-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-2-yl]ethenyl-(2,2-dimethylpropanoyloxymethoxy)phosphoryl]oxymethyl 2,2-dimethylpropanoate
CAS Number1882067-09-5
PubChem CID178203560
IUPAC Name[2-[(2R,3R,4R,5R)-3-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-2-yl]ethenyl-(2,2-dimethylpropanoyloxymethoxy)phosphoryl]oxymethyl 2,2-dimethylpropanoate
Molecular FormulaC32H52N4O13P2
Molecular Weight762.7
XLogP2.5
Topological Polar Surface Area201
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count15
Rotatable Bond Count22
Heavy Atom Count51
Formal Charge0
Complexity1340
SMILES
CC(C)N(C(C)C)P(OCCC#N)O[C@@H]1[C@H](O[C@H]([C@@H]1OC)N2C=CC(=O)NC2=O)C=CP(=O)(OCOC(=O)C(C)(C)C)OCOC(=O)C(C)(C)C
InChI
InChI=1S/C32H52N4O13P2/c1-21(2)36(22(3)4)50(45-17-12-15-33)49-25-23(48-27(26(25)42-11)35-16-13-24(37)34-30(35)40)14-18-51(41,46-19-43-28(38)31(5,6)7)47-20-44-29(39)32(8,9)10/h13-14,16,18,21-23,25-27H,12,17,19-20H2,1-11H3,(H,34,37,40)/t23-,25-,26-,27-,50?/m1/s1
InChIKey
AJJPYIXDIHURAB-CIYDTTPESA-N
Chemical Structure
2D Structure
2D structure of [2-[(2R,3R,4R,5R)-3-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-2-yl]ethenyl-(2,2-dimethylpropanoyloxymethoxy)phosphoryl]oxymethyl 2,2-dimethylpropanoate
CAS: 1882067-09-5
CID: 178203560
Formula: C32H52N4O13P2
MW: 762.7
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight762.7
XLogP32.5
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count15
Rotatable Bond Count22
Exact Mass762.30061172
Monoisotopic Mass762.30061172
Topological Polar Surface Area201 Ų
Heavy Atom Count51
Formal Charge0
Complexity1340
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count1
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count1
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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Alternative Products

CatalogName
HY-W11199575'-VP-2'-OMe-U phosphoramidite
HY-W881465-015' (E) -VP-2'-OMe-U phosphoramidite
AR-M05429-015' (E) -VP-2'-OMe-Bz-A Phosphoramidite
HY-4031885' (E) -VP-2'-OMe-Bz-C Phosphoramidite
GTR19280408-012'-OMe-U (Bz) -CE-Phosphoramidite
AR-M05431-015' (E) -POM-VP-2'-OMe-C (Bz) Phosphoramidite
AR-M05430-015'- (E) -POM-VP-2'-OMe-G (ibu) Phosphoramidite
TGA61118-012'-OMe-5-Me-U ce-phosphoramidite
GTR19279984-015' (E) -VP-2'-O-methyl-U Phosphoramidite
M-2032-12'-OMe-rU-phosphoramidite

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