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Calcein

CAT: 0957-S5975-01Size: 200 mgDry Ice: NoHazardous: No
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CAT#:0957-S5975-01Size:200 mg
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Description
Calcein (Fluorexon) is a fluorescent fluid phase marker used to track and visualize cellular processes such as synaptic vesicle fusion. Calcein is also the fluorophore for live cells in the commonly used Live/Dead viability assay. (Calcein itself cannot penetrate the cell membrane and cannot be directly applied in experiments assessing live cells. In practice, Calcein AM is employed, which can enter cells and be hydrolyzed by intracellular enzymes, releasing the fluorescent Calcein compound, thereby achieving the labeling of live cells.)
CAS Number
1461-15-0
Synonyms
Fluorexon
Target
Dyes
Activity
Others
Molecular Formula
C30H26N2O13
Storage Conditions
3 years -20°C powder

Chemical Information

Calcein

Calcein is a xanthene dye. It has a role as a fluorochrome. It is functionally related to a fluoran.

CAS Number1461-15-0
PubChem CID65079
IUPAC Name2-[[7'-[[bis(carboxymethyl)amino]methyl]-3',6'-dihydroxy-3-oxospiro[2-benzofuran-1,9'-xanthene]-2'-yl]methyl-(carboxymethyl)amino]acetic acid
Molecular FormulaC30H26N2O13
Molecular Weight622.5
XLogP-3.1
Topological Polar Surface Area232
Hydrogen Bond Donor Count6
Hydrogen Bond Acceptor Count15
Rotatable Bond Count12
Heavy Atom Count45
Formal Charge0
Complexity1070
SMILES
C1=CC=C2C(=C1)C(=O)OC23C4=C(C=C(C(=C4)CN(CC(=O)O)CC(=O)O)O)OC5=C3C=C(C(=C5)O)CN(CC(=O)O)CC(=O)O
InChI
InChI=1S/C30H26N2O13/c33-21-7-23-19(5-15(21)9-31(11-25(35)36)12-26(37)38)30(18-4-2-1-3-17(18)29(43)45-30)20-6-16(22(34)8-24(20)44-23)10-32(13-27(39)40)14-28(41)42/h1-8,33-34H,9-14H2,(H,35,36)(H,37,38)(H,39,40)(H,41,42)
InChIKey
DEGAKNSWVGKMLS-UHFFFAOYSA-N
Chemical Structure
2D Structure
2D structure of Calcein
CAS: 1461-15-0
CID: 65079
Formula: C30H26N2O13
MW: 622.5
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight622.5
XLogP3-3.1
Hydrogen Bond Donor Count6
Hydrogen Bond Acceptor Count15
Rotatable Bond Count12
Exact Mass622.14348889
Monoisotopic Mass622.14348889
Topological Polar Surface Area232 Ų
Heavy Atom Count45
Formal Charge0
Complexity1070
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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Alternative Products

CatalogName
561699Calcein
B7755-.5Calcein AM (Calcein acetoxymethyl ester)
HY-101887-01Calcein Blue
1755-250Calcein AM

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