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5-Hydroxymethyl-2-deoxycytidine

CAT: 1410-M35230-01Size: 5 mgDry Ice: NoHazardous: No
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CAT#:1410-M35230-01Size:5 mg
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Description
5-Hydroxymethyl-2'-deoxycytidine is an oxidized derivative of 5-methyl-2'-deoxycytidine (5-mdC) in DNA, causing DNA damage reactions, chromosomal aberrations, replication fork damage, and loss of cell viability.5-Hydroxymethyl-2'-deoxycytidine is an oxidized derivative of 5-methyl-2'-deoxycytidine in DNA. Hydroxymethyl-2'-deoxycytidine replication fork instability is associated with the presence of poly (ADP-ribose) polymerase 1 (PARP1) on chromatin.
CAS Number
7226-77-9
Stability
≥ 2 years
Purity
>98% (HPLC)
Weight
257.24
Molecular Formula
C10H15N3O5
Notes
Research use only, not for human use.
Receptor
PARP

Chemical Information

5-Hydroxymethyldeoxycytidine monophosphate
CAS Number7226-77-9
PubChem CID169016
IUPAC Name4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-(hydroxymethyl)pyrimidin-2-one
Molecular FormulaC10H15N3O5
Molecular Weight257.24
XLogP-2.1
Topological Polar Surface Area129
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count5
Rotatable Bond Count3
Heavy Atom Count18
Formal Charge0
Complexity408
SMILES
C1[C@@H]([C@H](O[C@H]1N2C=C(C(=NC2=O)N)CO)CO)O
InChI
InChI=1S/C10H15N3O5/c11-9-5(3-14)2-13(10(17)12-9)8-1-6(16)7(4-15)18-8/h2,6-8,14-16H,1,3-4H2,(H2,11,12,17)/t6-,7+,8+/m0/s1
InChIKey
HMUOMFLFUUHUPE-XLPZGREQSA-N
Chemical Structure
2D Structure
2D structure of 5-Hydroxymethyldeoxycytidine monophosphate
CAS: 7226-77-9
CID: 169016
Formula: C10H15N3O5
MW: 257.24
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight257.24
XLogP3-2.1
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count5
Rotatable Bond Count3
Exact Mass257.10117059
Monoisotopic Mass257.10117059
Topological Polar Surface Area129 Ų
Heavy Atom Count18
Formal Charge0
Complexity408
Isotope Atom Count0
Defined Atom Stereocenter Count3
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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MBS6104660-015-(Hydroxymethyl)-2'-deoxycytidine
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