Kanamycin C

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CAS Number

2280-32-2

Synonyms

(2R,3S,4R,5R,6S) -5-amino-6- (((1R,2S,3S,4R,6S) -4,6-diamino-3- (((2S,3R,4S,5S,6R) -4-amino-3,5-dihydroxy-6- (hydroxymethyl) tetrahydro-2H-pyran-2-yl) oxy) -2-hydroxycyclohexyl) oxy) -2- (hydroxymethyl) tetrahydro-2H-pyran-3,4-diol; O-2-Amino-2-deoxy-?-D-glucopyranosyl- (1?4) -O-[3-amino-3-deoxy-?-D-glucopyranosyl- (1?6) ]-2-deoxy-D-streptamine

Molecular Formula

C18H36N4O11

Molecular Weight

484.51

API Name

Kanamycin

Chemical Information

Kanamycin C

Kanamycin C is a member of kanamycins. It is a conjugate base of a kanamycin C(4+).

CAS Number	2280-32-2
PubChem CID	439582
IUPAC Name	(2S,3R,4S,5S,6R)-4-amino-2-[(1S,2S,3R,4S,6R)-4,6-diamino-3-[(2S,3R,4R,5S,6R)-3-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-hydroxycyclohexyl]oxy-6-(hydroxymethyl)oxane-3,5-diol
Molecular Formula	C18H36N4O11
Molecular Weight	484.5
XLogP	-6.9
Topological Polar Surface Area	283
Hydrogen Bond Donor Count	11
Hydrogen Bond Acceptor Count	15
Rotatable Bond Count	6
Heavy Atom Count	33
Formal Charge	0
Complexity	638

SMILES

C1[C@@H]([C@H]([C@@H]([C@H]([C@@H]1N)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)N)O)O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)N)N

InChI

InChI=1S/C18H36N4O11/c19-4-1-5(20)16(33-18-13(28)8(21)10(25)6(2-23)31-18)14(29)15(4)32-17-9(22)12(27)11(26)7(3-24)30-17/h4-18,23-29H,1-3,19-22H2/t4-,5+,6+,7+,8-,9+,10+,11+,12+,13+,14-,15+,16-,17+,18+/m0/s1

InChIKey

WZDRWYJKESFZMB-FQSMHNGLSA-N

Chemical Structure

2D Structure

CAS: 2280-32-2

CID: 439582

Formula: C18H36N4O11

MW: 484.5

Interactive 3D Structure

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Computed Properties

Property	Value
Molecular Weight	484.5
XLogP3	-6.9
Hydrogen Bond Donor Count	11
Hydrogen Bond Acceptor Count	15
Rotatable Bond Count	6
Exact Mass	484.23805798
Monoisotopic Mass	484.23805798
Topological Polar Surface Area	283 Å²
Heavy Atom Count	33
Formal Charge	0
Complexity	638
Isotope Atom Count	0
Defined Atom Stereocenter Count	15
Undefined Atom Stereocenter Count	0
Defined Bond Stereocenter Count	0
Undefined Bond Stereocenter Count	0
Covalently-Bonded Unit Count	1
Compound Is Canonicalized	Yes

Related Products

Catalog	Name
AR-K01548-01	Kanamycin B
AR-K01010-01	Kanamycin D
AR-K01547-01	Kanamycin A Sulfate
AR-K01012-01	Kanamycin B Sulfate
AR-K01592-01	Kanamycin A-d2 Sulfate
AR-K01011-01	Kanamycin Impurity B
AR-K01007-01	Kanamycin A Related Compound 1
AR-K01593-01	Kanamycin B Impurity 1
AR-K01594-01	Kanamycin A Related Compound 1 Triacetate
AR-K01570-01	1,3''-Di-HABA Kanamycin A

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Kanamycin C

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