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MitoTracker Deep Red FM

CAT: 0013-GTR19314670-01Size: 50 µgDry Ice: NoHazardous: No
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CAT#:0013-GTR19314670-01Size:50 µg
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Description
MitoTracker Deep Red FM is a membrane potential-sensitive, far-red fluorescent dye that selectively stains mitochondria in live cells. It forms thiol-reactive adducts for stable labeling and is widely used in live-cell imaging, mitochondrial dynamics studies, and assessing Δψ in both in vitro and in vivo models.
CAS Number
873315-86-7
Molecular Weight
543.57
Storage Conditions
-20°C
Notes
For research use only.

Chemical Information

2-(5-(1-(4-(Chloromethyl)benzyl)-3,3-dimethylindolin-2-ylidene)penta-1,3-dien-1-yl)-1,3,3-trimethyl-3H-indol-1-ium chloride

See also: mitoTracker Deep Red 633 (preferred).

CAS Number873315-86-7
PubChem CID168447780
IUPAC Name(2E)-1-[[4-(chloromethyl)phenyl]methyl]-3,3-dimethyl-2-[(2E,4E)-5-(1,3,3-trimethylindol-1-ium-2-yl)penta-2,4-dienylidene]indole chloride
Molecular FormulaC34H36Cl2N2
Molecular Weight543.6
Topological Polar Surface Area6.3
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count2
Rotatable Bond Count6
Heavy Atom Count38
Formal Charge0
Complexity929
SMILES
CC1(C2=CC=CC=C2[N+](=C1/C=C/C=C/C=C/3\C(C4=CC=CC=C4N3CC5=CC=C(C=C5)CCl)(C)C)C)C.[Cl-]
InChI
InChI=1S/C34H36ClN2.ClH/c1-33(2)27-13-9-11-15-29(27)36(5)31(33)17-7-6-8-18-32-34(3,4)28-14-10-12-16-30(28)37(32)24-26-21-19-25(23-35)20-22-26;/h6-22H,23-24H2,1-5H3;1H/q+1;/p-1
InChIKey
IRSFLEQGOMAAPU-UHFFFAOYSA-M
Chemical Structure
2D Structure
2D structure of 2-(5-(1-(4-(Chloromethyl)benzyl)-3,3-dimethylindolin-2-ylidene)penta-1,3-dien-1-yl)-1,3,3-trimethyl-3H-indol-1-ium chloride
CAS: 873315-86-7
CID: 168447780
Formula: C34H36Cl2N2
MW: 543.6
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight543.6
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count2
Rotatable Bond Count6
Exact Mass542.2255545
Monoisotopic Mass542.2255545
Topological Polar Surface Area6.3 Ų
Heavy Atom Count38
Formal Charge0
Complexity929
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count3
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count2
Compound Is CanonicalizedYes

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