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CalFluor 580 azide

CAT: 0804-HY-D2288Size: 1 EachDry Ice: NoHazardous: No
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Description
CalFluor 580 azide is a fluorogenic azide probe that is activated by Cu-catalyzed or metal-free click reaction. CalFluor 580 azide is not fluorescent until it is reacted with alkynes[1].
CAS Number
1798306-00-9
UNSPSC
12171500
Target
Fluorescent Dye
Type
Dye Reagents
Related Pathways
Others
Field of Research
Others
Assay Protocol
https://www.medchemexpress.com/calfluor-580-azide.html
Solubility
10 mM in DMSO
Smiles
[N-]=[N+]=NC1=CC(C2=C3C=CC(C=C3[Si](C)(C)C4=C2C=CC(O)=C4)=O)=C(C=C1OCCOCC[N+](C)(CCCS(=O)([O-])=O)C)OCCOCC[N+](C)(CCCS(=O)([O-])=O)C
Molecular Formula
C39H55N5O12S2Si
Molecular Weight
878.10
References & Citations
[1]Subrata Munan, et al. Chronological development of functional fluorophores for bio-imaging. Chem Commun (Camb) . 2024 Jan 11;60 (5) :501-521.
Shipping Conditions
Room temperature
Scientific Category
Dye Reagents
Clinical Information
No Development Reported

Chemical Information

CalFluor 580 Azide
CAS Number1798306-00-9
PubChem CID134827728
IUPAC Name3-[2-[2-[4-azido-5-[2-[2-[dimethyl(3-sulfonatopropyl)azaniumyl]ethoxy]ethoxy]-2-(7-hydroxy-5,5-dimethyl-3-oxobenzo[b][1]benzosilin-10-yl)phenoxy]ethoxy]ethyl-dimethylazaniumyl]propane-1-sulfonate
Molecular FormulaC39H55N5O12S2Si
Molecular Weight878.1
Topological Polar Surface Area220
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count14
Rotatable Bond Count22
Heavy Atom Count59
Formal Charge0
Complexity1780
SMILES
C[N+](C)(CCCS(=O)(=O)[O-])CCOCCOC1=CC(=C(C=C1C2=C3C=CC(=O)C=C3[Si](C4=C2C=CC(=C4)O)(C)C)N=[N+]=[N-])OCCOCC[N+](C)(C)CCCS(=O)(=O)[O-]
InChI
InChI=1S/C39H55N5O12S2Si/c1-43(2,13-7-23-57(47,48)49)15-17-53-19-21-55-35-28-36(56-22-20-54-18-16-44(3,4)14-8-24-58(50,51)52)34(41-42-40)27-33(35)39-31-11-9-29(45)25-37(31)59(5,6)38-26-30(46)10-12-32(38)39/h9-12,25-28H,7-8,13-24H2,1-6H3,(H-2,45,46,47,48,49,50,51,52)
InChIKey
LIXHLIRZWOKDFN-UHFFFAOYSA-N
Chemical Structure
2D Structure
2D structure of CalFluor 580 Azide
CAS: 1798306-00-9
CID: 134827728
Formula: C39H55N5O12S2Si
MW: 878.1
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight878.1
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count14
Rotatable Bond Count22
Exact Mass877.30579109
Monoisotopic Mass877.30579109
Topological Polar Surface Area220 Ų
Heavy Atom Count59
Formal Charge0
Complexity1780
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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