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5-Hydroxymethylcytidine

CAT: 0024-sc-480669Size: 25 mgDry Ice: NoHazardous: No
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CAT#:0024-sc-480669Size:25 mg
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CAS Number
19235-17-7

Chemical Information

5-Hydroxymethylcytidine

5-Hydroxymethylcytidine is a pyrimidine nucleoside.

CAS Number19235-17-7
PubChem CID14367004
IUPAC Name4-amino-1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-(hydroxymethyl)pyrimidin-2-one
Molecular FormulaC10H15N3O6
Molecular Weight273.24
XLogP-2.7
Topological Polar Surface Area149
Hydrogen Bond Donor Count5
Hydrogen Bond Acceptor Count6
Rotatable Bond Count3
Heavy Atom Count19
Formal Charge0
Complexity437
SMILES
C1=C(C(=NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O)N)CO
InChI
InChI=1S/C10H15N3O6/c11-8-4(2-14)1-13(10(18)12-8)9-7(17)6(16)5(3-15)19-9/h1,5-7,9,14-17H,2-3H2,(H2,11,12,18)/t5-,6-,7-,9-/m1/s1
InChIKey
NFEXJLMYXXIWPI-JXOAFFINSA-N
Chemical Structure
2D Structure
2D structure of 5-Hydroxymethylcytidine
CAS: 19235-17-7
CID: 14367004
Formula: C10H15N3O6
MW: 273.24
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight273.24
XLogP3-2.7
Hydrogen Bond Donor Count5
Hydrogen Bond Acceptor Count6
Rotatable Bond Count3
Exact Mass273.09608521
Monoisotopic Mass273.09608521
Topological Polar Surface Area149 Ų
Heavy Atom Count19
Formal Charge0
Complexity437
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

Related Products

CatalogName
sc-4828095-Hydroxymethylcytosine
sc-2608033-Bromo-5-hydroxymethylpyridine
sc-2596512-Bromo-5-hydroxymethylpyridine
sc-259651A2-Bromo-5-hydroxymethylpyridine
sc-260803A3-Bromo-5-hydroxymethylpyridine
sc-2598712-Fluoro-5-hydroxymethylpyridine
sc-2542052-Chloro-5-hydroxymethylpyridine
sc-4822962-Hydroxy-5-hydroxymethylpyridine
sc-259871A2-Fluoro-5-hydroxymethylpyridine
sc-3448643-Amino-5-hydroxymethylpyridine

Alternative Products

CatalogName
296186-015-Hydroxymethylcytidine
TRC-H947092-0.5MG5-Hydroxymethylcytidine-13C,D2
NH15898-012'-Deoxy-5-hydroxymethylcytidine
TRC-M696250-5MG2'-O-Methyl-5-hydroxymethylcytidine
1619215-Hydroxymethylcytidine discontinued. See 296186
ND1771732'-Deoxy-5-hydroxymethylcytidine 5'-monophosphate sodium salt
ND71643-012'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate sodium, 100 mM aqueous solution
234404-015,5,5-Trifluoronorvaline
PDA866615,5,5-Trifluoropentanonitrile
JH2382995,5,5-trifluoroleucine

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