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BDP R6G azide

CAT: 0804-HY-D1330Size: InquireDry Ice: NoHazardous: No
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CAS Number
2183473-23-4
UNSPSC Description
BDP R6G azide is an anlong of BDP dye. BDP R6G azide is available that are tuned to match excitation and emission channels of classical xanthene and cyanine dyes. BDP R6G azide can be used in copper-catalyzed Click chemistry reactions with alkynes, DBCO and BCN. (λex=530 nm, λem=548 nm)[1].
Target Antigen
Fluorescent Dye
Type
Dye Reagents
Related Pathways
Others
Field of Research
Others
Assay Protocol
https://www.medchemexpress.com/bdp-r6g-azide.html
Solubility
10 mM in DMSO
Smiles
[N-]=[N+]=NCCCNC(CCC1=CC=C2C=C3C=CC(C4=CC=CC=C4)=[N]3[B+3]([F-])([N-]21)[F-])=O
Molecular Weight
422.24
References & Citations
[1]Yu P, et, al. Fluorescent labeling of s2T-incorporated DNA and m5s2U-modified RNA. Nucleosides Nucleotides Nucleic Acids. 2021;40(7):754-766.
Shipping Conditions
Room temperature
Clinical Information
No Development Reported

Chemical Information

BDP R6G azide
CAS Number2183473-23-4
PubChem CID131954332
IUPAC NameN-(3-azidopropyl)-3-(2,2-difluoro-12-phenyl-3-aza-1-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-1(12),4,6,8,10-pentaen-4-yl)propanamide
Molecular FormulaC21H21BF2N6O
Molecular Weight422.2
Topological Polar Surface Area51.4
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count6
Rotatable Bond Count8
Heavy Atom Count31
Formal Charge0
Complexity845
SMILES
[B-]1(N2C(=CC=C2CCC(=O)NCCCN=[N+]=[N-])C=C3[N+]1=C(C=C3)C4=CC=CC=C4)(F)F
InChI
InChI=1S/C21H21BF2N6O/c23-22(24)29-17(10-12-21(31)26-13-4-14-27-28-25)7-8-18(29)15-19-9-11-20(30(19)22)16-5-2-1-3-6-16/h1-3,5-9,11,15H,4,10,12-14H2,(H,26,31)
InChIKey
PVLRRJLEAGIMJG-UHFFFAOYSA-N
Chemical Structure
2D Structure
2D structure of BDP R6G azide
CAS: 2183473-23-4
CID: 131954332
Formula: C21H21BF2N6O
MW: 422.2
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight422.2
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count6
Rotatable Bond Count8
Exact Mass422.1837958
Monoisotopic Mass422.1837958
Topological Polar Surface Area51.4 Ų
Heavy Atom Count31
Formal Charge0
Complexity845
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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