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BODIPY TMR-X SE

CAT: 0931-T82839-01Size: 1 mgDry Ice: NoHazardous: No
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CAT#:0931-T82839-01Size:1 mg
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24/48H Stock Items & 2 to 6 Weeks non Stock Items.
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CAS Number
217190-15-3
Target
Others
Related Pathways
Others
Bioactivity
BODIPY TMR-X SE is a potent fluorescent dye that labels primary amines (R-NH2) in proteins, amine-modified oligonucleotides, and other amine-containing molecules, producing bright orange fluorescence when bound to proteins or antibodies (λex=544 nm, λem=570 nm) [1][2].
Smiles
O=C(ON1C(=O)CCC1=O)CCCCCNC(=O)CCC=2C(=C3C=C4C=CC(C=5C=CC(OC)=CC5)=[N]4[B+3]([F-])([F-])[N-]3C2C)C
Molecular Formula
C31H35BF2N4O6
Molecular Weight
608.44
Shipping Conditions
Ice Packs
Storage Temperature
-20°C

Chemical Information

Bodipy tmr-X

BODIPY TMR-X is a pyrrolidinone and a BODIPY dye. It has a role as a fluorochrome. It is functionally related to a 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene.

CAS Number217190-15-3
PubChem CID25164047
IUPAC Name(2,5-dioxopyrrolidin-1-yl) 6-[3-[2,2-difluoro-12-(4-methoxyphenyl)-4,6-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-5-yl]propanoylamino]hexanoate
Molecular FormulaC31H35BF2N4O6
Molecular Weight608.4
Topological Polar Surface Area110
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count9
Rotatable Bond Count13
Heavy Atom Count44
Formal Charge0
Complexity1260
SMILES
[B-]1(N2C(=CC=C2C3=CC=C(C=C3)OC)C=C4[N+]1=C(C(=C4C)CCC(=O)NCCCCCC(=O)ON5C(=O)CCC5=O)C)(F)F
InChI
InChI=1S/C31H35BF2N4O6/c1-20-25(13-15-28(39)35-18-6-4-5-7-31(42)44-38-29(40)16-17-30(38)41)21(2)36-27(20)19-23-10-14-26(37(23)32(36,33)34)22-8-11-24(43-3)12-9-22/h8-12,14,19H,4-7,13,15-18H2,1-3H3,(H,35,39)
InChIKey
GRDQURHVJJVDRY-UHFFFAOYSA-N
Chemical Structure
2D Structure
2D structure of Bodipy tmr-X
CAS: 217190-15-3
CID: 25164047
Formula: C31H35BF2N4O6
MW: 608.4
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight608.4
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count9
Rotatable Bond Count13
Exact Mass608.2617713
Monoisotopic Mass608.2617713
Topological Polar Surface Area110 Ų
Heavy Atom Count44
Formal Charge0
Complexity1260
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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Alternative Products

CatalogName
HY-110211-01BODIPY TMR-X SE
GTR19346211-01Bodipy TMR-X muscimol
HY-D1593BODIPY TMR-X alkyne
HY-D2292BODIPY TMR acid
HY-D1592BODIPY TMR C5-maleimide
HY-D2291BODIPY TMR NHS ester
HY-D2290Demethoxy-BODIPY TMR NHS ester
HY-D1588-01BODIPY-X-Alkyne
HY-110212BODIPY TR-X
HY-114352BODIPY FL-X

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