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DiO

CAT: 0804-HY-D0969-01Size: 5 mgDry Ice: NoHazardous: No
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CAT#:0804-HY-D0969-01Size:5 mg
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Description
DiO is a long-chain carbocyanine dye. Carbocyanine dyes are widely used as Di to label cells, organelles, liposomes, viruses and lipoproteins[2].
CAS Number
34215-57-1
Product Name Alternative
DiOC18 (3) ; 3,3'-Dioctadecyloxacarbocyanine perchlorate
UNSPSC
12171500
Hazard Statement
H302, H315, H319, H335
Target
Fluorescent Dye
Type
Dye Reagents
Related Pathways
Others
Field of Research
Others
Assay Protocol
https://www.medchemexpress.com/3,3′-Dioctadecyloxacarbocyanine_perchlorate.html
Purity
99.91
Solubility
DMF : 10 mg/mL (ultrasonic) |DMSO : 5 mg/mL (ultrasonic; warming; heat to 60°C)
Smiles
O=Cl(=O)([O-])=O.CCCCCCCCCCCCCCCCCCN1C(C=CC=C2)=C2O/C1=C/C=C/C(OC3=C4C=CC=C3)=[N+]4CCCCCCCCCCCCCCCCCC
Molecular Formula
C53H85ClN2O6
Molecular Weight
881.70
Precautions
H302, H315, H319, H335
References & Citations
[1]Warren GL, et al. Redistribution of cell membrane probes following contraction-induced injury of mouse soleus muscle.|[2]Bhowmik BB, et al. Photophysical studies of 3,3' dioctadecyloxacarbocyanine dye in model biological membranes and different solvents. Chem Phys Lipids. 2001 Feb;109 (2) :175-83.|[3]Gan WB, et al. Multicolor "DiOlistic" labeling of the nervous system using lipophilic dye combinations. Neuron. 2000 Aug;27 (2) :219-25.|[4]Bhowmik BB, et al. Photophysical studies of 3,3' dioctadecyloxacarbocyanine dye in model biological membranes and different solvents. Chem Phys Lipids. 2001 Feb;109 (2) :175-83.
Shipping Conditions
Room Temperature
Storage Conditions
4°C (Powder, sealed storage, away from moisture and light)
Scientific Category
Dye Reagents
Clinical Information
No Development Reported

Chemical Information

3,3'-Dioctadecyloxacarbocyanine perchlorate

DiOC18(3) dye is a Cy3 dye, a member of 1,3-benzoxazoles and an organic perchlorate salt. It has a role as a fluorochrome. It contains a diOC18(3)(1+).

CAS Number34215-57-1
PubChem CID5706734
IUPAC Name(2Z)-3-octadecyl-2-[(E)-3-(3-octadecyl-1,3-benzoxazol-3-ium-2-yl)prop-2-enylidene]-1,3-benzoxazole perchlorate
Molecular FormulaC53H85ClN2O6
Molecular Weight881.7
Topological Polar Surface Area104
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count7
Rotatable Bond Count36
Heavy Atom Count62
Formal Charge0
Complexity1020
SMILES
CCCCCCCCCCCCCCCCCCN\1C2=CC=CC=C2O/C1=C\C=C\C3=[N+](C4=CC=CC=C4O3)CCCCCCCCCCCCCCCCCC.[O-]Cl(=O)(=O)=O
InChI
InChI=1S/C53H85N2O2.ClHO4/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-37-46-54-48-40-33-35-42-50(48)56-52(54)44-39-45-53-55(49-41-34-36-43-51(49)57-53)47-38-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2;2-1(3,4)5/h33-36,39-45H,3-32,37-38,46-47H2,1-2H3;(H,2,3,4,5)/q+1;/p-1
InChIKey
GFZPJHFJZGRWMQ-UHFFFAOYSA-M
Chemical Structure
2D Structure
2D structure of 3,3'-Dioctadecyloxacarbocyanine perchlorate
CAS: 34215-57-1
CID: 5706734
Formula: C53H85ClN2O6
MW: 881.7
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight881.7
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count7
Rotatable Bond Count36
Exact Mass880.6096161
Monoisotopic Mass880.6096161
Topological Polar Surface Area104 Ų
Heavy Atom Count62
Formal Charge0
Complexity1020
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count2
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count2
Compound Is CanonicalizedYes

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