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N-PEG3-N'- (azide-PEG3) -Cy5

CAT: 0013-GTR19225170-01Size: 100 mgDry Ice: NoHazardous: No
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CAT#:0013-GTR19225170-01Size:100 mg
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Description
This bifunctional polyethylene glycol (PEG) linker, featuring an amine and an azide terminus conjugated to Cy5, is essential for constructing PROTACs. It enables the study of targeted protein degradation mechanisms in both cellular and animal models, facilitating research in oncology and drug discovery.
CAS Number
2226235-96-5
Field of Research
Cell Biology, Pharmacology & Drug Discovery
Smiles
[Cl-].[N-]=[N+]=NCCOCCOCCOCCN1C=2C=CC=CC2C (C1=CC=CC=CC3=[N+] (C=4C=CC=CC4C3 (C) C) CCOCCOCCO) (C) C
Molecular Formula
C39H54ClN5O6
Molecular Weight
724.33
Storage Conditions
-20°C
Notes
For research use only.

Chemical Information

2-[2-[2-[2-[(1E,3E,5Z)-5-[1-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethyl]-3,3-dimethylindol-2-ylidene]penta-1,3-dienyl]-3,3-dimethylindol-1-ium-1-yl]ethoxy]ethoxy]ethanol chloride
CAS Number2226235-96-5
PubChem CID166641740
IUPAC Name2-[2-[2-[2-[(1E,3E,5Z)-5-[1-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethyl]-3,3-dimethylindol-2-ylidene]penta-1,3-dienyl]-3,3-dimethylindol-1-ium-1-yl]ethoxy]ethoxy]ethanol chloride
Molecular FormulaC39H54ClN5O6
Molecular Weight724.3
Topological Polar Surface Area87
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count10
Rotatable Bond Count23
Heavy Atom Count51
Formal Charge0
Complexity1190
SMILES
CC1(C2=CC=CC=C2[N+](=C1/C=C/C=C/C=C\3/C(C4=CC=CC=C4N3CCOCCOCCOCCN=[N+]=[N-])(C)C)CCOCCOCCO)C.[Cl-]
InChI
InChI=1S/C39H54N5O6.ClH/c1-38(2)32-12-8-10-14-34(32)43(19-23-47-27-29-49-25-21-45)36(38)16-6-5-7-17-37-39(3,4)33-13-9-11-15-35(33)44(37)20-24-48-28-31-50-30-26-46-22-18-41-42-40;/h5-17,45H,18-31H2,1-4H3;1H/q+1;/p-1
InChIKey
XDWWTFOMGZZKBB-UHFFFAOYSA-M
Chemical Structure
2D Structure
2D structure of 2-[2-[2-[2-[(1E,3E,5Z)-5-[1-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethyl]-3,3-dimethylindol-2-ylidene]penta-1,3-dienyl]-3,3-dimethylindol-1-ium-1-yl]ethoxy]ethoxy]ethanol chloride
CAS: 2226235-96-5
CID: 166641740
Formula: C39H54ClN5O6
MW: 724.3
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight724.3
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count10
Rotatable Bond Count23
Exact Mass723.3762622
Monoisotopic Mass723.3762622
Topological Polar Surface Area87 Ų
Heavy Atom Count51
Formal Charge0
Complexity1190
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count3
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count2
Compound Is CanonicalizedYes

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Alternative Products

CatalogName
MBS5771319N-PEG3-N'-(azide-PEG3)-Cy5
HY-141061N-PEG3-N'- (azide-PEG3) -Cy5
MBS5771314N,N'-bis-(azide-PEG3)-Cy5
T18455-01N, N'-bis- (azide-PEG3) -Cy5
HY-141063N- (m-PEG4) -N'- (azide-PEG3) -Cy5
MBS5771282N-(m-PEG4)-N'-(azide-PEG3)-Cy5
HY-141066N-(azide-PEG3)-N'-(Mal-PEG4)-Cy5
HY-141041N- (Azide-PEG3) -N'- (PEG4-acid) -Cy5
T18376-01N- (azide-PEG3) -N'- (Mal-PEG4) -Cy5
MBS5771236N-(Azide-PEG3)-N'-(PEG4-acid)-Cy5

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