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5,6-Dihydrouridine

CAT: 0013-GTR19202815-01Size: 1 mgDry Ice: NoHazardous: No
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CAT#:0013-GTR19202815-01Size:1 mg
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Description
5,6-Dihydrouridine is a conserved tRNA modification present in the D-loop across Eukaryota, Bacteria, and some Archaea. This small molecule is used in research to study RNA structure, modification enzymes, and translational regulation in both in vitro biochemical assays and cellular studies.
CAS Number
5627-05-4
Product Name Alternative
5,6 Dihydrouridine, 5,6Dihydrouridine, 5,6-Dihydrouridine, Human Endogenous Metabolite, Endogenous Metabolite, EndogenousMetabolite
Field of Research
Metabolism Research
Purity
99.27% (May vary between batches)
Solubility
10% DMSO+40% PEG300+5% Tween 80+45% Saline:2 mg/mL (8.12 mM) ; DMSO:32.1 mg/mL (130.37 mM) ; H2O:90 mg/mL (365.53 mM)
Smiles
OC[C@H]1O[C@H] ([C@H] (O) [C@@H]1O) N1CCC (=O) NC1=O
Molecular Formula
C9H14N2O6
Molecular Weight
246.22
Storage Conditions
-20°C
Notes
For research use only.

Chemical Information

Dihydrouridine

Dihydrouridine is the uridine derivative obtained by formal hydrogenation of the endocyclic double bond in the uracil ring. It has a role as a biomarker.

CAS Number5627-05-4
PubChem CID94312
IUPAC Name1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,3-diazinane-2,4-dione
Molecular FormulaC9H14N2O6
Molecular Weight246.22
XLogP-2.1
Topological Polar Surface Area119
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count6
Rotatable Bond Count2
Heavy Atom Count17
Formal Charge0
Complexity335
SMILES
C1CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
InChI
InChI=1S/C9H14N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h4,6-8,12,14-15H,1-3H2,(H,10,13,16)/t4-,6-,7-,8-/m1/s1
InChIKey
ZPTBLXKRQACLCR-XVFCMESISA-N
Chemical Structure
2D Structure
2D structure of Dihydrouridine
CAS: 5627-05-4
CID: 94312
Formula: C9H14N2O6
MW: 246.22
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight246.22
XLogP3-2.1
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count6
Rotatable Bond Count2
Exact Mass246.08518617
Monoisotopic Mass246.08518617
Topological Polar Surface Area119 Ų
Heavy Atom Count17
Formal Charge0
Complexity335
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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