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5-Methylcytidine

CAT: 0013-GTR19157464-02Size: 1 gDry Ice: NoHazardous: No
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CAT#:0013-GTR19157464-02Size:1 g
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Description
5-Methylcytidine is a modified nucleoside derived from 5-methylcytosine and is a minor constituent of RNA as well as DNA for certain organisms.
CAS Number
2140-61-6
Purity
>98% (HPLC)
Solubility
DMSO:51 mg/mL (198.25 mM)
Smiles
Cc1cn ([C@@H]2O[C@H] (CO) [C@@H] (O) [C@H]2O) c (=O) nc1N
Molecular Formula
C10H15N3O5
Molecular Weight
257.24
Storage Conditions
Storage temperature: -20°C. Stability: ≥ 2 years
Notes
For research use only.

Chemical Information

5-Methylcytidine

5-methylcytidine is a methylcytidine.

CAS Number2140-61-6
PubChem CID92918
IUPAC Name4-amino-1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidin-2-one
Molecular FormulaC10H15N3O5
Molecular Weight257.24
XLogP-2
Topological Polar Surface Area129
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count5
Rotatable Bond Count2
Heavy Atom Count18
Formal Charge0
Complexity422
SMILES
CC1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
InChI
InChI=1S/C10H15N3O5/c1-4-2-13(10(17)12-8(4)11)9-7(16)6(15)5(3-14)18-9/h2,5-7,9,14-16H,3H2,1H3,(H2,11,12,17)/t5-,6-,7-,9-/m1/s1
InChIKey
ZAYHVCMSTBRABG-JXOAFFINSA-N
Chemical Structure
2D Structure
2D structure of 5-Methylcytidine
CAS: 2140-61-6
CID: 92918
Formula: C10H15N3O5
MW: 257.24
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight257.24
XLogP3-2
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count5
Rotatable Bond Count2
Exact Mass257.10117059
Monoisotopic Mass257.10117059
Topological Polar Surface Area129 Ų
Heavy Atom Count18
Formal Charge0
Complexity422
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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