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Bz-rC Phosphoramidite

CAT: 0931-T38566Size: 25 mgDry Ice: NoHazardous: No
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CAT#:0931-T38566Size:25 mg
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24/48H Stock Items & 2 to 6 Weeks non Stock Items.
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CAS Number
118380-84-0
Target
DNA/RNA Synthesis, Others
Related Pathways
Others, Cell Cycle/Checkpoint, DNA Damage/DNA Repair
Bioactivity
Bz-rC Phosphoramidite is a phosphinamide monomer used in oligonucleotide synthesis.
Smiles
COc1ccc(cc1)C(OC[C@H]1O[C@H]([C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1OP(OCCC#N)N(C(C)C)C(C)C)n1ccc(NC(=O)c2ccccc2)nc1=O)(c1ccccc1)c1ccc(OC)cc1
Molecular Formula
C52H66N5O9PSi
Molecular Weight
964.185
Shipping Conditions
Ice Packs
Storage Temperature
-20°C

Chemical Information

Bz-rC Phosphoramidite
CAS Number118380-84-0
PubChem CID11029435
IUPAC NameN-[1-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-3-[tert-butyl(dimethyl)silyl]oxy-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyoxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
Molecular FormulaC52H66N5O9PSi
Molecular Weight964.2
Topological Polar Surface Area153
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count11
Rotatable Bond Count22
Heavy Atom Count68
Formal Charge0
Complexity1690
SMILES
CC(C)N(C(C)C)P(OCCC#N)O[C@@H]1[C@H](O[C@H]([C@@H]1O[Si](C)(C)C(C)(C)C)N2C=CC(=NC2=O)NC(=O)C3=CC=CC=C3)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC
InChI
InChI=1S/C52H66N5O9PSi/c1-36(2)57(37(3)4)67(63-34-18-32-53)65-46-44(35-62-52(39-21-16-13-17-22-39,40-23-27-42(60-8)28-24-40)41-25-29-43(61-9)30-26-41)64-49(47(46)66-68(10,11)51(5,6)7)56-33-31-45(55-50(56)59)54-48(58)38-19-14-12-15-20-38/h12-17,19-31,33,36-37,44,46-47,49H,18,34-35H2,1-11H3,(H,54,55,58,59)/t44-,46-,47-,49-,67?/m1/s1
InChIKey
VWNXEDLLHIFAOL-YOVDOAOFSA-N
Chemical Structure
2D Structure
2D structure of Bz-rC Phosphoramidite
CAS: 118380-84-0
CID: 11029435
Formula: C52H66N5O9PSi
MW: 964.2
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight964.2
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count11
Rotatable Bond Count22
Exact Mass963.43674223
Monoisotopic Mass963.43674223
Topological Polar Surface Area153 Ų
Heavy Atom Count68
Formal Charge0
Complexity1690
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count1
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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Alternative Products

CatalogName
MBS5799195Bz-rC Phosphoramidite
PA183-100DMTr-2'-O-C6-rC (Bz) -3'-CE-Phosphoramidite
PA042-1KDMTr-2'-O-MOE-rC (Bz) -3'-CE-Phosphoramidite
PA035-1KDMTr-2'-O-Me-rC (Bz) -3'-CE Phosphoramidite
GTR19280433-012'-O-MOEOE-5-Me-rC (Bz) -3'-Phosphoramidite
GTR19279767-01DMTr-2'-O-propyl-rC (Bz) -3'-CE-phosphoramidite
MBS5785146Bz-rA Phosphoramidite
GTR19171018Ac-rC Phosphoramidite
PA249-10DMTr-2'-O-Me-rC (Bz) -3'- (L) -DPSE-Phosphoramidite
PA244-100DMTr-S-cEt-5-Me-rC (Bz) -3'-CE-Phosphoramidite

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