Cy5-DBCO

CAT: 0931-T18948-01Size: 1 mgDry Ice: NoHazardous: No

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CAT#:0931-T18948-01Size:1 mg

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CAS Number

1564286-24-3

Target

Others

Related Pathways

Others

Purity

0.9771

Bioactivity

Cy5-DBCO is a near-infrared, anthocyanine fluorescent dye Cy5 (Cyanine 5) derivative with an excitation wavelength of 650 nm and an emission wavelength of 670 nm.DBCO-Sulfo-Cy5 contains a DBCO moiety, which can undergo SPAAC click chemistry with molecules that contain Azide moieties.

Smiles

O=C(NCCC(=O)N1C=2C=CC=CC2C#CC=3C=CC=CC3C1)CCCCCN4C5=CC=C(C=C5C(C4=CC=CC=CC6=[N+](C=7C=CC(=CC7C6(C)C)S(=O)(=O)O)CCCS(=O)(=O)[O-])(C)C)S(=O)(=O)O

Molecular Formula

C52H56N4O11S3

Molecular Weight

1009.22

Shipping Conditions

Ice Packs

Storage Temperature

-20°C

Chemical Information

Sulfo-Cy5 DBCO

See also: DBCO-Cy5 (preferred).

CAS Number	1564286-24-3
PubChem CID	136374347
IUPAC Name	1-[6-[[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]amino]-6-oxohexyl]-2-[(1E,3E,5E)-5-[3,3-dimethyl-5-sulfo-1-(3-sulfopropyl)indol-2-ylidene]penta-1,3-dienyl]-3,3-dimethylindol-1-ium-5-sulfonate
Molecular Formula	C52H56N4O11S3
Molecular Weight	1009.2
XLogP	5.8
Topological Polar Surface Area	247
Hydrogen Bond Donor Count	3
Hydrogen Bond Acceptor Count	12
Rotatable Bond Count	17
Heavy Atom Count	70
Formal Charge	0
Complexity	2440

SMILES

CC1(C2=C(C=CC(=C2)S(=O)(=O)[O-])[N+](=C1/C=C/C=C/C=C/3\C(C4=C(N3CCCS(=O)(=O)O)C=CC(=C4)S(=O)(=O)O)(C)C)CCCCCC(=O)NCCC(=O)N5CC6=CC=CC=C6C#CC7=CC=CC=C75)C

InChI

InChI=1S/C52H56N4O11S3/c1-51(2)42-34-40(69(62,63)64)25-27-45(42)54(31-14-6-9-22-49(57)53-30-29-50(58)56-36-39-18-11-10-16-37(39)23-24-38-17-12-13-19-44(38)56)47(51)20-7-5-8-21-48-52(3,4)43-35-41(70(65,66)67)26-28-46(43)55(48)32-15-33-68(59,60)61/h5,7-8,10-13,16-21,25-28,34-35H,6,9,14-15,22,29-33,36H2,1-4H3,(H3-,53,57,59,60,61,62,63,64,65,66,67)

InChIKey

LQHUKJFMCCLWEL-UHFFFAOYSA-N

Chemical Structure

2D Structure

CAS: 1564286-24-3

CID: 136374347

Formula: C52H56N4O11S3

MW: 1009.2

Interactive 3D Structure

Loading 3D structure...

View on PubChem Raw 3D data

Computed Properties

Property	Value
Molecular Weight	1009.2
XLogP3	5.8
Hydrogen Bond Donor Count	3
Hydrogen Bond Acceptor Count	12
Rotatable Bond Count	17
Exact Mass	1008.31077214
Monoisotopic Mass	1008.31077214
Topological Polar Surface Area	247 Å²
Heavy Atom Count	70
Formal Charge	0
Complexity	2440
Isotope Atom Count	0
Defined Atom Stereocenter Count	0
Undefined Atom Stereocenter Count	0
Defined Bond Stereocenter Count	3
Undefined Bond Stereocenter Count	0
Covalently-Bonded Unit Count	1
Compound Is Canonicalized	Yes

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T84784-01	Cy5.5 DBCO
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T205209-01	Cy5-PEG-DBCO (MW 5000)
T205069-01	Cy5-PEG-DBCO (MW 2000)
T84794-01	DBCO-PEG2-DBCO
T17804-01	DBCO-PEG5-DBCO
T17784-01	DBCO-PEG13-DBCO
T15071-01	DBCO-PEG4-DBCO
T17781-01	DBCO-PEG10-DBCO

Alternative Products

Catalog	Name
BIPG2221-01	Cy5 DBCO
GTR19340990-01	Cy5-DBCO
923-AAT	DBCO-Cy5
CLK-1046-1	DBCO-Cy5.5
CLK-A130-25	DBCO-Sulfo-Cy5
HY-151720-01	Cy5.5 DBCO
sc-496979	Sulfo-Cy5 DBCO
HY-D1625	Cy5 DBCO (chloride)
FL078048-5K-01	Cy5-PEG-DBCO, 5K
FL078048-1K-01	Cy5-PEG-DBCO, 1K

Cy5-DBCO

Chemical Information

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