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Cy3 NHS ester

CAT: 0931-T18946-02Size: 5 mgDry Ice: NoHazardous: No
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CAT#:0931-T18946-02Size:5 mg
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24/48H Stock Items & 2 to 6 Weeks non Stock Items.
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CAS Number
1393363-07-9
Target
Others
Related Pathways
Others
Purity
0.9803
Bioactivity
Cy3 NHS ester is a fluorescent dye used to label amino groups in proteins, peptides, antibodies, and oligonucleotides. The excitation/emission (Ex/Em) values ​​of Cy3 NHS ester are 550 nm/570 nm.
Smiles
[Cl-].C[N+]1=C(\C=C\C=C2\N(CCCCCC(=O)ON3C(=O)CCC3=O)c3ccccc3C2(C)C)C(C)(C)c2ccccc12
Molecular Formula
C34H40ClN3O4
Molecular Weight
590.15
Shipping Conditions
Ice Packs
Storage Temperature
-20°C

Chemical Information

Cy3 NHS ester
CAS Number1393363-07-9
PubChem CID155487015
IUPAC Name(2,5-dioxopyrrolidin-1-yl) 6-[(2Z)-3,3-dimethyl-2-[(E)-3-(1,3,3-trimethylindol-1-ium-2-yl)prop-2-enylidene]indol-1-yl]hexanoate chloride
Molecular FormulaC34H40ClN3O4
Molecular Weight590.1
Topological Polar Surface Area69.9
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count6
Rotatable Bond Count10
Heavy Atom Count42
Formal Charge0
Complexity1120
SMILES
CC1(C2=CC=CC=C2[N+](=C1/C=C/C=C\3/C(C4=CC=CC=C4N3CCCCCC(=O)ON5C(=O)CCC5=O)(C)C)C)C.[Cl-]
InChI
InChI=1S/C34H40N3O4.ClH/c1-33(2)24-14-8-10-16-26(24)35(5)28(33)18-13-19-29-34(3,4)25-15-9-11-17-27(25)36(29)23-12-6-7-20-32(40)41-37-30(38)21-22-31(37)39;/h8-11,13-19H,6-7,12,20-23H2,1-5H3;1H/q+1;/p-1
InChIKey
KWDMHANYPGHTLW-UHFFFAOYSA-M
Chemical Structure
2D Structure
2D structure of Cy3 NHS ester
CAS: 1393363-07-9
CID: 155487015
Formula: C34H40ClN3O4
MW: 590.1
Interactive 3D Structure
Loading 3D structure...
Computed Properties
PropertyValue
Molecular Weight590.1
Hydrogen Bond Donor Count0
Hydrogen Bond Acceptor Count6
Rotatable Bond Count10
Exact Mass589.2707345
Monoisotopic Mass589.2707345
Topological Polar Surface Area69.9 Ų
Heavy Atom Count42
Formal Charge0
Complexity1120
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count2
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count2
Compound Is CanonicalizedYes