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5-Ethynyl-2'-deoxyuridine

CAT: 0931-T17341-01Size: 50 mgDry Ice: NoHazardous: No
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CAT#:0931-T17341-01Size:50 mg
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24/48H Stock Items & 2 to 6 Weeks non Stock Items.
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CAS Number
61135-33-9
Target
PROTAC Linker
Related Pathways
PROTAC
Purity
>99.99%
Bioactivity
5-Ethynyl-2'-deoxyuridine (EdU) is a nucleoside analog of thymidine used to monitor de novo DNA synthesis through click chemistry and serves as an alkyl chain-based PROTAC linker for synthesizing PROTACs.
Smiles
OC[C@H]1O[C@H](C[C@@H]1O)n1cc(C#C)c(=O)[nH]c1=O
Molecular Formula
C11H12N2O5
Molecular Weight
252.22
Shipping Conditions
Ice Packs
Storage Temperature
-20°C

Chemical Information

5-Ethynyl-2'-deoxyuridine

5-ethynyl-2'-deoxyuridine is a pyrimidine 2'-deoxyribonucleoside having eniluracil as the nucleobase. It is functionally related to an eniluracil.

CAS Number61135-33-9
PubChem CID472172
IUPAC Name5-ethynyl-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
Molecular FormulaC11H12N2O5
Molecular Weight252.22
XLogP-1.3
Topological Polar Surface Area99.1
Hydrogen Bond Donor Count3
Hydrogen Bond Acceptor Count5
Rotatable Bond Count3
Heavy Atom Count18
Formal Charge0
Complexity463
SMILES
C#CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO)O
InChI
InChI=1S/C11H12N2O5/c1-2-6-4-13(11(17)12-10(6)16)9-3-7(15)8(5-14)18-9/h1,4,7-9,14-15H,3,5H2,(H,12,16,17)/t7-,8+,9+/m0/s1
InChIKey
CDEURGJCGCHYFH-DJLDLDEBSA-N
Chemical Structure
2D Structure
2D structure of 5-Ethynyl-2'-deoxyuridine
CAS: 61135-33-9
CID: 472172
Formula: C11H12N2O5
MW: 252.22
Interactive 3D Structure
Loading 3D structure...
View on PubChemRaw 3D data
Computed Properties
PropertyValue
Molecular Weight252.22
XLogP3-1.3
Hydrogen Bond Donor Count3
Hydrogen Bond Acceptor Count5
Rotatable Bond Count3
Exact Mass252.07462149
Monoisotopic Mass252.07462149
Topological Polar Surface Area99.1 Ų
Heavy Atom Count18
Formal Charge0
Complexity463
Isotope Atom Count0
Defined Atom Stereocenter Count3
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently-Bonded Unit Count1
Compound Is CanonicalizedYes

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Alternative Products

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9565-505-Ethynyl-2'-deoxyuridine
011835-015-Ethynyl-2’-deoxyuridine
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C07962-1gEdU (5-Ethynyl-2'-deoxyuridine)
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